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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6899048 chr5:49747090 G/A LOC647121 chr1:121260910-121313686:+ 0.37 7.92 1.67E-14 Box Plot
THCA rs6899783 chr6:151740852 T/A NEK5 chr13:52607747-52703214:- 0.48 6.07 2.57E-9 Box Plot
THCA rs6900665 chr6:26487169 C/T RNF5P1 chr8:38458179-38458718:- 0.56 6 3.95E-9 Box Plot
THCA rs6901017 chr6:28152583 T/C BTN3A2 chr6:26365387-26378548:+ -0.31 -6.8 3.22E-11 Box Plot
THCA rs6901225 chr6:26670491 A/G ZNF322B chr9:99957633-99961910:- -0.59 -6.34 5.32E-10 Box Plot
THCA rs6901368 chr6:170820292 T/C NCRNA00115 chr1:761587-762902:- 0.59 6.73 4.8E-11 Box Plot
THCA rs6901425 chr6:26670646 A/G ZNF322B chr9:99957633-99961910:- -0.58 -6.32 5.84E-10 Box Plot
THCA rs6901575 chr6:28250984 G/A BTN3A2 chr6:26365387-26378548:+ -0.5 -9.8 9.06E-21 Box Plot
THCA rs6902268 chr6:27186172 T/G ZNF322B chr9:99957633-99961910:- -0.41 -6.52 1.75E-10 Box Plot
THCA rs6902389 chr6:26322153 A/G HCG4 chr6:29759530-29760527:- -0.49 -5.92 6.09E-9 Box Plot
THCA rs6902389 chr6:26322153 A/G ZFP57 chr6:29640169-29648887:- 0.52 6.2 1.24E-9 Box Plot
THCA rs6902392 chr6:26322115 C/T HCG4 chr6:29759530-29760527:- -0.49 -5.92 6.09E-9 Box Plot
THCA rs6902392 chr6:26322115 C/T ZFP57 chr6:29640169-29648887:- 0.52 6.2 1.24E-9 Box Plot
THCA rs6902411 chr6:26630269 A/C ZNF322B chr9:99957633-99961910:- 0.76 15.77 2.05E-45 Box Plot
THCA rs6903015 chr6:26322526 A/G HCG4 chr6:29759530-29760527:- -0.49 -5.92 6.09E-9 Box Plot